Write GenBank records — write_gbk • rgbio

Writes GenBank records from sequence, feature, and metadata components.

Usage

write_gbk(
  file,
  sequences,
  features = NULL,
  metadata = NULL,
  append = FALSE,
  validate = TRUE,
  line_width = 80
)

Arguments

file: Character path to output file.
sequences: DNAStringSet or named character vector.
features: GRanges with type and qualifiers in mcols(), or tidy feature table with columns type, start, end, strand, qualifiers.
metadata: DataFrame, data.frame, or list with record metadata.
append: Logical; append to file.
validate: Logical; validate inputs.
line_width: Integer sequence line width.

Value

Logical TRUE on success.